PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023879962.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 187aa MW: 21396 Da PI: 4.6811 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 135.1 | 4.8e-42 | 8 | 126 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeelvv++L++k++ +++ +vi+++d+y ++PwdL+ k+ ae ++wyf+s+r +nr+t +gyWka g++++v+++ XP_023879962.1 8 LPPGFRFCPTDEELVVHFLHRKASLLPCHP-DVIPDLDLYPYDPWDLDGKALAEGNKWYFYSRRT--------QNRVTCNGYWKAMGNEEPVMNS 93 79*************************999.99**************977778899******984........58******************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kk+Lvfy+g+ap+g kt+W+m+eyrl XP_023879962.1 94 SSKSVGMKKILVFYTGEAPSGIKTNWIMQEYRL 126 *******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MGDNNVNLPP GFRFCPTDEE LVVHFLHRKA SLLPCHPDVI PDLDLYPYDP WDLDGKALAE 60 GNKWYFYSRR TQNRVTCNGY WKAMGNEEPV MNSSSKSVGM KKILVFYTGE APSGIKTNWI 120 MQEYRLSDSA GSTSRSSKRR GHPKIDYSTW VICRVYERDD DDDGTELSCL DEVFLSLDDL 180 DEISLPI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 7e-75 | NAC family protein |