PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023879910.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 276aa    MW: 30396.8 Da    PI: 4.2687
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023879910.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-192775355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  XP_023879910.1 27 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 75
                    56******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MNSSTTTTPK SKKKQTQTQE TTTSGRFLGV RRRPWGRYAA EIRDPSTKER HWLGTFDTAE  60
EAALAYDRAA RSMRGSRART NFVYSDMPPG SSVTSIVSPD EPQQNFFDVP PPSSTPTQPD  120
PTPQTFSNQE TNTEFSYSSM SDIGGDQFWA SSSSVYYQQQ PALFDFDNNT SSTAYVSHNY  180
SNQMSDQLPP FPSDISGDIG SNMSVADSSE DMGQAAWSDS TSLTTGFDLE GNGSYSYMGM  240
GFDSSEYVHS PLFSRMPPVS DNVPESFNLG SSAFFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.16e-39ERF family protein