PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023879877.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 750aa MW: 86473.4 Da PI: 6.7431

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023879877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.1	1.5e-23	68	154	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Yn+YA++ GFs+++++++k+ +++ + ++vCskeg+r++ ++++e++ +raetr+gCka++ +kk d++w v k+++ HnHel XP_023879877.1 68 YYNAYARRKGFSIQVNHTRKN-KDKIRVGIEYVCSKEGFRRQCNEDNERTGLERAETRMGCKAMIGLKKV-DDTWIVCKFVEGHNHELL 154 8**************9999.66668999************999999*************9.9*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 750 aa Download sequence
MSANNKEPET ISLCDMVDGL VHDESEINED QNNVDLSLDD SNQPFACNRH SEPHLDMVFE 60 NLEAARAYYN AYARRKGFSI QVNHTRKNKD KIRVGIEYVC SKEGFRRQCN EDNERTGLER 120 AETRMGCKAM IGLKKVDDTW IVCKFVEGHN HELLTPKSTS LLRGHRVITS AQKNLIDTLN 180 ESGIAPSKIM SVLSKESGGD YNVGCIPVDI QNYLGSKRRK LLQDGDVQGM YKYFIESQCK 240 NPGFVYGIEV DEYGCMGNCF WADARSRMAY QYFGDVVTFD ATYQTNRYKM PFVPFTGVNH 300 HHQSVMFGCA LLVSETAESY TWLLKTWLNA MPENSPSTII TDDDKAMAKA IADVLPNATY 360 RLCLWHLLQK VPEQLSHVNN KYPHFQEEFY HCIHDTVTIE EFELEWSKIM EKYGLGDNDW 420 LRNLYMRLER WVPAYLRTSF CAGMSTTRES MNKFFKDYVH SSTTISDFVY QYKLALNARY 480 LKEKEQDVKT KNSVPILKTC YKLEAKVAKV YTRKMFMKFQ EELFCSKKYM ASKYHEEGVK 540 KIYKVVAHGR ESPFYEVSLD IVETKAICTC HMFEFIGIIC RHILVVFVKK SLVHFLPLHY 600 ILDRWTINAK KHIVHDISSD VVQVEPQVSS TMMRNSLMLQ FLEVAEVGSQ SEKQYKHLGQ 660 TLRKVHEELL AMQDVHDVDD LESFDNTTLN NQGSSMARLN PLVIANTLYS TSFVQDSLST 720 VTYPSTSSST MHIYPNQSSF TDPLQQFQES

Sequence ? help Back to Top

Protein Sequence Length: 750 aa Download sequence

MSANNKEPET ISLCDMVDGL VHDESEINED QNNVDLSLDD SNQPFACNRH SEPHLDMVFE  60
NLEAARAYYN AYARRKGFSI QVNHTRKNKD KIRVGIEYVC SKEGFRRQCN EDNERTGLER  120
AETRMGCKAM IGLKKVDDTW IVCKFVEGHN HELLTPKSTS LLRGHRVITS AQKNLIDTLN  180
ESGIAPSKIM SVLSKESGGD YNVGCIPVDI QNYLGSKRRK LLQDGDVQGM YKYFIESQCK  240
NPGFVYGIEV DEYGCMGNCF WADARSRMAY QYFGDVVTFD ATYQTNRYKM PFVPFTGVNH  300
HHQSVMFGCA LLVSETAESY TWLLKTWLNA MPENSPSTII TDDDKAMAKA IADVLPNATY  360
RLCLWHLLQK VPEQLSHVNN KYPHFQEEFY HCIHDTVTIE EFELEWSKIM EKYGLGDNDW  420
LRNLYMRLER WVPAYLRTSF CAGMSTTRES MNKFFKDYVH SSTTISDFVY QYKLALNARY  480
LKEKEQDVKT KNSVPILKTC YKLEAKVAKV YTRKMFMKFQ EELFCSKKYM ASKYHEEGVK  540
KIYKVVAHGR ESPFYEVSLD IVETKAICTC HMFEFIGIIC RHILVVFVKK SLVHFLPLHY  600
ILDRWTINAK KHIVHDISSD VVQVEPQVSS TMMRNSLMLQ FLEVAEVGSQ SEKQYKHLGQ  660
TLRKVHEELL AMQDVHDVDD LESFDNTTLN NQGSSMARLN PLVIANTLYS TSFVQDSLST  720
VTYPSTSSST MHIYPNQSSF TDPLQQFQES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-153	FAR1 family protein