PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023879666.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 559aa MW: 62361.3 Da PI: 4.4961

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023879666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169	1.6e-52	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv +k++++ + i+ vdiyk+ePwdLp k k+k+++ ewyfFs dkky +++r+nrat++gyWk+tgkd++v XP_023879666.1 10 LAPGFRFHPTDEELVRYYLKRKVLNKPFKF-DPISVVDIYKSEPWDLPsKsKLKSRDLEWYFFSALDKKYGNSSRTNRATEKGYWKTTGKDRPVR 103 579************************9.99**********95247777777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_023879666.1 104 Q-NSRTVGMKKTLVYHNGRAPRGARSNWVMHEYRL 137 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MGRGESATSL APGFRFHPTD EELVRYYLKR KVLNKPFKFD PISVVDIYKS EPWDLPSKSK 60 LKSRDLEWYF FSALDKKYGN SSRTNRATEK GYWKTTGKDR PVRQNSRTVG MKKTLVYHNG 120 RAPRGARSNW VMHEYRLIDE DLEKSGLVLD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW 180 EDDDVEVFMP GEAAAAVAAA AEEVMVGDDA FVETNDLDQN LEINIPSENP PPLNFYYGET 240 SNHAEHSGEF IEDDQKPIIG TGETSEPQYD QFLNIPEQYG MGTNPVKDEY YVESSKNVNP 300 AEVNYSLNEF FMDAADNAPM GDGLYLEAND LSNPVEADPE GFDMLDEYLT FFDADDDNSQ 360 HLTFDPSEIM GTDNSVFDQA PQKHENGGTD QVFNETLHLP EAQRNNDASS SKHKPEATIY 420 ESDDKHPFVK RASHMLGSIP APPAFAAEFP AKDHAALGLH SAAQSSSSVR VTAGMIRIRN 480 MTLTGNGMDW SLGKNNDASL FLSFVLPQAD MNSANSVPLA GPLTGKGSSV VSRCWCFFLF 540 FWVLLLSVSF KIGSYICIK

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MGRGESATSL APGFRFHPTD EELVRYYLKR KVLNKPFKFD PISVVDIYKS EPWDLPSKSK  60
LKSRDLEWYF FSALDKKYGN SSRTNRATEK GYWKTTGKDR PVRQNSRTVG MKKTLVYHNG  120
RAPRGARSNW VMHEYRLIDE DLEKSGLVLD AFVLCRIFQK SGTGPKNGEQ YGAPFVEEEW  180
EDDDVEVFMP GEAAAAVAAA AEEVMVGDDA FVETNDLDQN LEINIPSENP PPLNFYYGET  240
SNHAEHSGEF IEDDQKPIIG TGETSEPQYD QFLNIPEQYG MGTNPVKDEY YVESSKNVNP  300
AEVNYSLNEF FMDAADNAPM GDGLYLEAND LSNPVEADPE GFDMLDEYLT FFDADDDNSQ  360
HLTFDPSEIM GTDNSVFDQA PQKHENGGTD QVFNETLHLP EAQRNNDASS SKHKPEATIY  420
ESDDKHPFVK RASHMLGSIP APPAFAAEFP AKDHAALGLH SAAQSSSSVR VTAGMIRIRN  480
MTLTGNGMDW SLGKNNDASL FLSFVLPQAD MNSANSVPLA GPLTGKGSSV VSRCWCFFLF  540
FWVLLLSVSF KIGSYICIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	1e-151	NAC family protein