PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023879656.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 468aa MW: 52839.7 Da PI: 5.1136

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023879656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.4e-52	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+evdiyk+ePwdL k +k++++ewyfFs dkky +g r nrat++gyWkatg+d++v+ XP_023879656.1 16 LAPGFRFHPTDEELVIYYLKRKVCGKPFRI-NAISEVDIYKSEPWDLAdKsGLKTRDQEWYFFSALDKKYGNGARMNRATNKGYWKATGNDRPVH 109 579*************************.89**********75347788999*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++ glkktLvf++grap+g +t+Wvmheyrl XP_023879656.1 110 H-DSRTAGLKKTLVFHSGRAPDGLRTNWVMHEYRL 143 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MRRETPSLPA PPPTALAPGF RFHPTDEELV IYYLKRKVCG KPFRINAISE VDIYKSEPWD 60 LADKSGLKTR DQEWYFFSAL DKKYGNGARM NRATNKGYWK ATGNDRPVHH DSRTAGLKKT 120 LVFHSGRAPD GLRTNWVMHE YRLVDEELEK ARAGATMQDS YVLCRVFHKN NIGPPNSHRY 180 APFIEEEWDD SAPVLFLGEQ AGKEVVAVHN PCDVEAGYDA YAEEAGHDEC DEDAGNVVCA 240 EENGHYEYVE NGYVECVENR QDSFIEGNNF EQDTQSINEA PLSASEVPRE NQNALVVCKS 300 ERMDDYPSPC LANPRPSPLL RYKRRRHNES NSNHSNGLET STRTSQDHCS STTTTAATPL 360 TTTTTAPATT RNFLSALVEY SLLESIEPKD SLSVSPPFDI ANLDSSVPPS CLKFIQDLQN 420 EIHKISVERE TLKFELMSAQ TMLNILQSRI DLLNKENEDL KRSVRDVK

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MRRETPSLPA PPPTALAPGF RFHPTDEELV IYYLKRKVCG KPFRINAISE VDIYKSEPWD  60
LADKSGLKTR DQEWYFFSAL DKKYGNGARM NRATNKGYWK ATGNDRPVHH DSRTAGLKKT  120
LVFHSGRAPD GLRTNWVMHE YRLVDEELEK ARAGATMQDS YVLCRVFHKN NIGPPNSHRY  180
APFIEEEWDD SAPVLFLGEQ AGKEVVAVHN PCDVEAGYDA YAEEAGHDEC DEDAGNVVCA  240
EENGHYEYVE NGYVECVENR QDSFIEGNNF EQDTQSINEA PLSASEVPRE NQNALVVCKS  300
ERMDDYPSPC LANPRPSPLL RYKRRRHNES NSNHSNGLET STRTSQDHCS STTTTAATPL  360
TTTTTAPATT RNFLSALVEY SLLESIEPKD SLSVSPPFDI ANLDSSVPPS CLKFIQDLQN  420
EIHKISVERE TLKFELMSAQ TMLNILQSRI DLLNKENEDL KRSVRDVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.2	1e-118	NAC family protein