PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023879234.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 364aa    MW: 40979.1 Da    PI: 5.3202
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023879234.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19145195155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_023879234.1 145 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 195
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MSESLATMNH HYQNHSAQVK YTEHRVNIAK LLKPVQISET SSSTELMKQQ QQQQRRVVRI  60
SVTDGNATDS SSDDEDRGRQ RVKRFVNEIT IEPSCSTPPQ AENDTVWRKR SCSTRTKSAR  120
KKCAPKARGV TKVPPTTTTT TTTEKKFRGV RQRPWGKWAA EIRDPLRRVR LWLGTYDTAE  180
EAAMVYDNAA IQLRGPDALT NFTSPPAKSS PETHKPVVRT SSGYNSGDES HNNNNKNSPT  240
TVLLPCPSPS NEEADSLMRE TRDIGDLREE SCVSENFSEF SEHSGFDSLI PDDIFDFRSS  300
VPDLLFDDTS VNDNVFAGED FGFGESDMFM SSCENFGFGY SRWHADDYFQ DIGDIFVSDP  360
FLAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-60ERF family protein