PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023879109.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 232aa    MW: 26348.7 Da    PI: 8.9995
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023879109.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.62.2e-32155213159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+
  XP_023879109.1 155 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHIHS 213
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MSTTSQTMLN QGLFEDQEVP TQMGYYPFSS NLTLPAPIGC HQSLKVFTNT LPPSLASDAP  60
STNLNGTLLT SPTTKHREDT TCDFGGPQLL SLHRSSTNLW AWNGDVGECL STKRAAGGDD  120
NHLGVSTLKM KKIKARRKVR EPRFCFKTMS DVDVLDDGYK WRKYGQKVVK NTQHPRSYYR  180
CTQDNCRVKK RVERLAEDPR MVITTYEGRH IHSPSHDMED SQTPSQLNNF FW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39410.15e-63WRKY family protein