PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023879060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 194aa MW: 21577.3 Da PI: 4.8666 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.3 | 6.1e-16 | 22 | 72 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr k+ ++Wv+e+r+p +k+ r++lg+f tae+Aa+a++ a +l+g XP_023879060.1 22 PVYRGVR-SKNPNKWVSEVREP---NKKSRIWLGTFPTAEMAARAHDVATIALRG 72 68****9.888*******9998...347*********************999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MLASRNPKKR DGRKKFKETR HPVYRGVRSK NPNKWVSEVR EPNKKSRIWL GTFPTAEMAA 60 RAHDVATIAL RGRYACLNFA DSLWRLPVPT STAAKDIQRA ALEAAEAFRP AELAGVSGDD 120 LMQSSENEAT VEVAAETEIE PEDTSFMDEE AVFGMPELLR NMAEGMLLPP PPPCYGGDNM 180 ETDSSEVSLW SYSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 5e-65 | ERF family protein |