PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023878452.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 539aa MW: 60607.6 Da PI: 4.128

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023878452.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.4	2.9e-07	258	305	3	47
SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +WT+eE+e++ ++v + Wk+ + ++ R+ k+++s+++++ XP_023878452.1 258 KWTEEEEEIFHEVVYSNPVSlcrnFWKKLSLVFP-SRSKKELVSYYFNV 305 7***********999998**********.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MGFKRSFDDE EFPELPCKHP RKPDYRNTRT PFTELVPCNN AYNASQEPIS SGEVVDGFHK 60 FQWHEELGKD TVTEVSNLGD KYLETNEPLS SFSLSSNEED DGSGASAYSY LSPEYFEVDF 120 PRRTLVPFED VSSSYLDRYP RKQVPLGADH QANIPLWGEH INNKKLDLTE NCNSSPSDGG 180 SSEEKLMGTC VIPLPDMSTD KGYYAGCGRT ACDCLDSGSV RCVRQHVNEA REELRKTLGH 240 DKFVNLGFSD MGEEVAHKWT EEEEEIFHEV VYSNPVSLCR NFWKKLSLVF PSRSKKELVS 300 YYFNVFMLWR RAAQNRSTFL DIDSDDDEWH GSNRGSHEVG DSEEDEDSAI ISLADQDNQV 360 DSSEEDDCSS DDDDDDNDGD DDCNDDGGKG HGREDVLEED GGVDILPEAP VLKSHDEREF 420 DKLVQHVDNT PGSDQEDLYA QDDSCLSFDC QANMSSSCGS VNNGAALQAR GINSEHGKRS 480 EADWCSDVGQ FYLLEPCDAK VWDARCTSTS LKNFDILSPW NMIKEDFGEG TLDNKKRDD

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MGFKRSFDDE EFPELPCKHP RKPDYRNTRT PFTELVPCNN AYNASQEPIS SGEVVDGFHK  60
FQWHEELGKD TVTEVSNLGD KYLETNEPLS SFSLSSNEED DGSGASAYSY LSPEYFEVDF  120
PRRTLVPFED VSSSYLDRYP RKQVPLGADH QANIPLWGEH INNKKLDLTE NCNSSPSDGG  180
SSEEKLMGTC VIPLPDMSTD KGYYAGCGRT ACDCLDSGSV RCVRQHVNEA REELRKTLGH  240
DKFVNLGFSD MGEEVAHKWT EEEEEIFHEV VYSNPVSLCR NFWKKLSLVF PSRSKKELVS  300
YYFNVFMLWR RAAQNRSTFL DIDSDDDEWH GSNRGSHEVG DSEEDEDSAI ISLADQDNQV  360
DSSEEDDCSS DDDDDDNDGD DDCNDDGGKG HGREDVLEED GGVDILPEAP VLKSHDEREF  420
DKLVQHVDNT PGSDQEDLYA QDDSCLSFDC QANMSSSCGS VNNGAALQAR GINSEHGKRS  480
EADWCSDVGQ FYLLEPCDAK VWDARCTSTS LKNFDILSPW NMIKEDFGEG TLDNKKRDD