PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023878053.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 316aa    MW: 35710.4 Da    PI: 7.4712
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023878053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.74.6e-123880246
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     g +++eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
   XP_023878053.1 38 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 80
                     569******************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MAPVVTGSLY HKKLGLKRCG KSCRLRWLNY LRPNIKHGGF SEEEDNIICS LYISIGSRWS  60
IIAAQLPGRT DNDIKNYWNT RLKKKLLGKQ RKEQQARRGT SSLKQEMKRG VEMVSDNNNN  120
QNPYWPELPV LAHIPFSNQE PRFNDHASIR KFLIKLGGRF SDIDVPIHDG TSSLQFTNGI  180
SSTTQQIYEH SMVNNIPSSA PIDAVLNNTG NIQFAQAQSY MDGVELNMLQ GQSCFPVELE  240
EIVYNNPQGL DGLEFLCGED MVYNRIGSTS TSSESVGWGE MSSVIHPPVA SNYEGMLQRT  300
HRECVFEELR CQTCFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.18e-44MYB family protein