PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023878053.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 316aa MW: 35710.4 Da PI: 7.4712 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.7 | 4.6e-12 | 38 | 80 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_023878053.1 38 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 80 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence |
MAPVVTGSLY HKKLGLKRCG KSCRLRWLNY LRPNIKHGGF SEEEDNIICS LYISIGSRWS 60 IIAAQLPGRT DNDIKNYWNT RLKKKLLGKQ RKEQQARRGT SSLKQEMKRG VEMVSDNNNN 120 QNPYWPELPV LAHIPFSNQE PRFNDHASIR KFLIKLGGRF SDIDVPIHDG TSSLQFTNGI 180 SSTTQQIYEH SMVNNIPSSA PIDAVLNNTG NIQFAQAQSY MDGVELNMLQ GQSCFPVELE 240 EIVYNNPQGL DGLEFLCGED MVYNRIGSTS TSSESVGWGE MSSVIHPPVA SNYEGMLQRT 300 HRECVFEELR CQTCFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 8e-44 | MYB family protein |