PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023877901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HB-other | ||||||||
Protein Properties | Length: 279aa MW: 31801.6 Da PI: 5.8848 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 19.9 | 1.3e-06 | 12 | 70 | 6 | 52 |
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrR 52 ft ++++ +e+ F++ ++ + ++ +++A++ +t +qV+ WFqNr XP_023877901.1 12 EFTLTEIKDMEKIFKEigEQSLGQAFFQDIATSFscsasragksAITWEQVQSWFQNRQ 70 689999*********888***************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MEGFGPRDSL SEFTLTEIKD MEKIFKEIGE QSLGQAFFQD IATSFSCSAS RAGKSAITWE 60 QVQSWFQNRQ EQLQDKVTPS SGALKLFDDL SDVPISSKAP ESSLNPKGKK ISDLSGLTYE 120 AKSKKDNAWY DVASFLNYKF LSTGELAVRV RFSGFGNEED EWVNVKRGVR ERSIPLEHSE 180 CQKVKVGDLV LCFQEREDHA VYHDAYVVGI HKRQHDIRGC RCIFTVRYDH DNTEEKVDFG 240 RICCRPKHYS QSALDIEVGP TQHYSQPTFD IQEGVKFPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18380.1 | 1e-64 | HB-other family protein |