PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023877857.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 798aa MW: 88022.6 Da PI: 6.7188

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023877857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.2	1.9e-08	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I r+++ + q++++++ + XP_023877857.1 52 AWTRQEEESFFTALRQVGKN-FEKITRRVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MQTELQVSLP SESHLHPENR SVQNGDLDVT SSTANYVQPK KPAKRPTRQW AAWTRQEEES 60 FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPALCLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLLKDRR KNVKKRPSQG ENSPPAASST 180 VSNQSRGSGQ DARTIKLVLV DSQNIQKLGS GKTSFKRNVN VGVNRSNNKG DSTNMKPARQ 240 RRKPGVASSA AYKKWEKAAI AGVSLVADAA EHLERAATDK EVEHDPGAPG QKDSDNVGNV 300 LPPLPTFSQN FVENNILTSM KLKLQLFPID DGTRRSLEMD KHNPHLELTL STRKKISSVL 360 EHLNRKWGNS SIAAGELMLF PYGVQRENLV GYQRWTQDSV VSAADVYAVL GRPPVFRLRY 420 GWFSNAELAS AVLQSPTASC SFLGEQNVNE DNIKGNNIGS APISAPLAND RSVDLYEDQL 480 TSLNEKNDLP PSIDVPSEMN NYNCMGPNSK LAESADPAGN ISWNRKEAGD GTVTRQLEDL 540 DDLRLGASTA ISAGEWADSL TNISIGDLLS GVSHDIDANC IDQPVAESSQ CLQQIPFSCD 600 SFDAAIAAHI SKHQDKMGYQ PPMPSHASSI WDAEETCDAF SFKKNLVLRQ GDPTLSSVAP 660 PGSCKQTSPT SLEVTGCLVE ELPEVEKPVE NPVQGDRMDE SQCDPHILDN SAKDFNTLAD 720 IYWPESLGPL DLDIPSSKYH SEDLILSDSL SGLNRLIASS LDAFQNCSFF GLDKKESASA 780 VEAREATSFP NFKIGSGV

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MQTELQVSLP SESHLHPENR SVQNGDLDVT SSTANYVQPK KPAKRPTRQW AAWTRQEEES  60
FFTALRQVGK NFEKITRRVQ SKNKDQVRHY YYRLVRRMNK LLGPALCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLLKDRR KNVKKRPSQG ENSPPAASST  180
VSNQSRGSGQ DARTIKLVLV DSQNIQKLGS GKTSFKRNVN VGVNRSNNKG DSTNMKPARQ  240
RRKPGVASSA AYKKWEKAAI AGVSLVADAA EHLERAATDK EVEHDPGAPG QKDSDNVGNV  300
LPPLPTFSQN FVENNILTSM KLKLQLFPID DGTRRSLEMD KHNPHLELTL STRKKISSVL  360
EHLNRKWGNS SIAAGELMLF PYGVQRENLV GYQRWTQDSV VSAADVYAVL GRPPVFRLRY  420
GWFSNAELAS AVLQSPTASC SFLGEQNVNE DNIKGNNIGS APISAPLAND RSVDLYEDQL  480
TSLNEKNDLP PSIDVPSEMN NYNCMGPNSK LAESADPAGN ISWNRKEAGD GTVTRQLEDL  540
DDLRLGASTA ISAGEWADSL TNISIGDLLS GVSHDIDANC IDQPVAESSQ CLQQIPFSCD  600
SFDAAIAAHI SKHQDKMGYQ PPMPSHASSI WDAEETCDAF SFKKNLVLRQ GDPTLSSVAP  660
PGSCKQTSPT SLEVTGCLVE ELPEVEKPVE NPVQGDRMDE SQCDPHILDN SAKDFNTLAD  720
IYWPESLGPL DLDIPSSKYH SEDLILSDSL SGLNRLIASS LDAFQNCSFF GLDKKESASA  780
VEAREATSFP NFKIGSGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein