PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023877771.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | G2-like | ||||||||
Protein Properties | Length: 280aa MW: 31609.8 Da PI: 7.396 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 108.7 | 3.1e-34 | 32 | 86 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_023877771.1 32 KPRLRWTAELHERFVDAVTQLGGPDKATPKTIMKVMGVKGLTLYHLKSHLQKFRL 86 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 74 | 2.1e-23 | 34 | 85 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+ktI++ mg kg+tl+++ks++qk++ XP_023877771.1 34 RLRWTAELHERFVDAVTQLGGPdkaTPKTIMKVMGvKGLTLYHLKSHLQKFR 85 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MFSPKKPTMN STHDRQICVQ GDTGLVLTTD PKPRLRWTAE LHERFVDAVT QLGGPDKATP 60 KTIMKVMGVK GLTLYHLKSH LQKFRLGKQP HKDLNDQAVR DASASEFQRD GAATSRIMGH 120 HFNENIRHTE ALRTQMEVRR RLNEQLEVQK HLQMRIDAQG KYMETILDKA CRTLAGENVN 180 SQGYKLVGYQ GIDEIGNMRD FGFSLNLPPI EDLHVNEDNS HCGFQIQDTG VAVERLHLED 240 DALKLGGQLQ MALTNDDSST VNFMPRSSQS QCSYNSPLNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79430.2 | 2e-83 | G2-like family protein |