PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023877712.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HSF | ||||||||
Protein Properties | Length: 201aa MW: 23387.5 Da PI: 6.7673 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 107.9 | 8e-34 | 25 | 125 | 2 | 102 |
HHHHHHHHHC.........TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXX CS HSF_DNA-bind 2 Flkklyeile.........deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFk 87 Fl+k+y++le d++ ++++sw+++g+ fvv+ + ef++ +LpkyFkh+nf+SF+RQLn+YgFkk+++++ weFkh++F+ XP_023877712.1 25 FLSKTYDLLEgvaddedddDDDKRNIVSWNAEGTGFVVWSPAEFSELMLPKYFKHNNFSSFIRQLNTYGFKKTSSKR---------WEFKHEKFQ 110 9*********999999988889***************************************************9998.........********* PP XXXXXXXXXXXXXXX CS HSF_DNA-bind 88 kgkkellekikrkks 102 kg ++ll +i rkk XP_023877712.1 111 KGCRNLLVEITRKKC 125 ************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MATNEMELNL LGTSQSPRAR CPAPFLSKTY DLLEGVADDE DDDDDDKRNI VSWNAEGTGF 60 VVWSPAEFSE LMLPKYFKHN NFSSFIRQLN TYGFKKTSSK RWEFKHEKFQ KGCRNLLVEI 120 TRKKCEPSIF PAYLKASEEN TMTAMEENNN HQLLLEENKN LRREKLELQT QIAQFKALES 180 KLLDYLAQCM GNNQNKVRKL C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36990.1 | 9e-37 | HSF family protein |