PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023877635.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 567aa MW: 61123.8 Da PI: 6.8323

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023877635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00092	442	467	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp C k ++++ Lk H + H XP_023877635.1 442 FKCPviGCEKAYKNQNGLKYHKQHgH 467 89*******************98766 PP
2	zf-C2H2	14.2	0.00013	503	522	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 y+C+ Cgk++++ Lk H XP_023877635.1 503 YRCEVCGKRYKNLNGLKYHR 522 9******************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MAGSASPIDI ATTRSSSGSP RTQQSNLTSQ LQQPRIDVHE ESSSSMNTTG ARQDFAVQRG 60 RQESVGMLGT TPYGSRAIPV GDGYRRESNQ VSGSLVGGMS WGGISMGSFI RDDILMTGTS 120 PYNFQSPSFH SSSYLPKMEA NYMKDYVCCD IRLDSMHELL QHYEEAHAQQ PTQTMGRTPK 180 DQQFPSTRAA NATSTAAAVQ MQSQFQQPHL QDSHISRNGS IQPAASPLFS GQSADHVAFD 240 NLDDMDMDDS APALQAPLQG SQFQPQPQFG RQQPRGPAVN VNLANAFQGP GMQTPTTPRA 300 GQQGMGLPNN PTVSSVNTPT LGTQTASQQT ATPDSSMPGT PAEAADMDYS QLGNLSTFDY 360 NQIMQGNYDM NNLQISNGNN ASCGTIDDPA KRLLSKQGYG NKGFPNPALA NSSELAKRIR 420 ENQLLNGLAG VGGFVGEEIK PFKCPVIGCE KAYKNQNGLK YHKQHGHQNQ QLKENPDGTF 480 SIVDPTTSIP YPGTVGMEKE KPYRCEVCGK RYKNLNGLKY HRQHSPPCNP ELKMNKPSLA 540 GMPTNVQDIS VNVAGAGLVG MNDGVGY

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MAGSASPIDI ATTRSSSGSP RTQQSNLTSQ LQQPRIDVHE ESSSSMNTTG ARQDFAVQRG  60
RQESVGMLGT TPYGSRAIPV GDGYRRESNQ VSGSLVGGMS WGGISMGSFI RDDILMTGTS  120
PYNFQSPSFH SSSYLPKMEA NYMKDYVCCD IRLDSMHELL QHYEEAHAQQ PTQTMGRTPK  180
DQQFPSTRAA NATSTAAAVQ MQSQFQQPHL QDSHISRNGS IQPAASPLFS GQSADHVAFD  240
NLDDMDMDDS APALQAPLQG SQFQPQPQFG RQQPRGPAVN VNLANAFQGP GMQTPTTPRA  300
GQQGMGLPNN PTVSSVNTPT LGTQTASQQT ATPDSSMPGT PAEAADMDYS QLGNLSTFDY  360
NQIMQGNYDM NNLQISNGNN ASCGTIDDPA KRLLSKQGYG NKGFPNPALA NSSELAKRIR  420
ENQLLNGLAG VGGFVGEEIK PFKCPVIGCE KAYKNQNGLK YHKQHGHQNQ QLKENPDGTF  480
SIVDPTTSIP YPGTVGMEKE KPYRCEVCGK RYKNLNGLKY HRQHSPPCNP ELKMNKPSLA  540
GMPTNVQDIS VNVAGAGLVG MNDGVGY