PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023877411.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 409aa    MW: 43476.2 Da    PI: 9.6439
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023877411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H221.65.8e-07322344123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C  C++sF+r+++LkrH r H
  XP_023877411.1 322 FRCDQCPQSFNRNHDLKRHKRIH 344
                     89*******************99 PP
2zf-C2H224.75.9e-08350370121
                     EEETTTTEEESSHHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                     ++C++C+ksFsrk+ LkrH  
  XP_023877411.1 350 FPCGHCDKSFSRKDALKRHVL 370
                     89*****************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MGSQSLTSRR PHASNLPNFE LPPPPLSAYQ KYNNYFNPQP TATTLTSVGN LLTPPSNSSA  60
DGIGPGSSMT NTMSQQGGVA SFTPNNGGMW PPQNLNTTNS YGYQSSANSH SFGPGRPIFS  120
PSLNSIVRSP THGELSQSSY DMSGYSGSSM SMSGTSLPPV LSHQHMPMIG NHTPGTAPQS  180
SPINTQDAFA RPPPTPSYYS GSQPSSTPHQ ATFPSYSTGP SPVQQSPISA GGSLSKMSPI  240
NGHGASPSIH TQQQQYSTQQ RQFTYPTPGP VLSNVNNPNG QLALVGGMQQ GMMPGYNSGH  300
AAHLQHMYGP PQQAAPQNDR PFRCDQCPQS FNRNHDLKRH KRIHLAVKPF PCGHCDKSFS  360
RKDALKRHVL VKGCGKAQAS AEIKELDGSL SPISKAESLD QSPIITASA