PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023877239.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 244aa MW: 28647.8 Da PI: 4.1688 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39.8 | 1.4e-12 | 10 | 134 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiykv.ePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatg 87 p+++F P+++el+ +yL++kv g++ +e+ +++e+d+++v eP ++ ++ +e++ ++yfF++++ +++ + W+ XP_023877239.1 10 LPCIKFCPNEDELIYYYLHPKVIGEPlslggVEV-VHVPEFDVFRVkEPDKIWDMIWGEDSapdRVYFFTTASAAQS--------LLETCWRYEA 95 6899**********************55443333.359999**99879*99974443433335588***99987653........3456799887 PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + ++++ +g + +k+ + + ++ +++ W+m+ey+l XP_023877239.1 96 S-EVIYDEnTGYPIAIKRQFYYE--NHDSPQDGYWIMNEYSL 134 7.455554377789999998766..4555569********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MKVYFPSLML PCIKFCPNED ELIYYYLHPK VIGEPLSLGG VEVVHVPEFD VFRVKEPDKI 60 WDMIWGEDSA PDRVYFFTTA SAAQSLLETC WRYEASEVIY DENTGYPIAI KRQFYYENHD 120 SPQDGYWIMN EYSLDVEGSM LLLPSSSHVA CELCKNNLDE IDQNETTAFF DEYQCKTTTY 180 FDEYQNEIAI SFDEDQNETT TYFNEYQNEA TVSFDEDQNK TNSKKKKLPV QLQQCHPRKK 240 QNCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79580.1 | 1e-08 | NAC family protein |