PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876556.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 429aa MW: 47547.8 Da PI: 5.8529

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	122.6	2e-38	185	282	1	98
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 klfqrlws+e ei lL+G++d++a +g++p +d af+efvkks++++v+k qlv+K++rL+kK++++ + k+gk+p+fsk+h+qk++elskki XP_023876556.1 185 KLFQRLWSDENEIELLKGMLDYTALRGADPAADAAAFFEFVKKSLHVEVTKAQLVDKMKRLRKKYNNNAGRGKKGKDPTFSKPHEQKTYELSKKI 279 579******************************************************************************************** PP DUF573 96 Wgs 98 Wgs XP_023876556.1 280 WGS 282 *95 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MAPKRPSHLD DPPAASSSEE EEEETSSEDE EDEEEEEGES SSEEEEHKAE AAKIDSLPST 60 PVKPQPKKPD PPAPISNSKP QTHSSSSGSE SESETESGST PDPNVKPLAS KPMEPDPTPV 120 KATKPRSKPS SARSSATTKK RPNGEAEATP SKRVKKKDPE PKSQDVVVSP SEDSKKGGGG 180 GDEKKLFQRL WSDENEIELL KGMLDYTALR GADPAADAAA FFEFVKKSLH VEVTKAQLVD 240 KMKRLRKKYN NNAGRGKKGK DPTFSKPHEQ KTYELSKKIW GSVEAATETE KAKDINNGKA 300 KAKDNKNGKA KAKDNNNNNK NQKGNSLIRS LKEELTESSP VLYKYGEKME IDGDSGSGSC 360 LNGMLRFHKN VWLDERVIKR GLKLIDEEKK VELEERWKEV ELAELEVYVK QTELIKDQAR 420 LILEAYKDH

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MAPKRPSHLD DPPAASSSEE EEEETSSEDE EDEEEEEGES SSEEEEHKAE AAKIDSLPST  60
PVKPQPKKPD PPAPISNSKP QTHSSSSGSE SESETESGST PDPNVKPLAS KPMEPDPTPV  120
KATKPRSKPS SARSSATTKK RPNGEAEATP SKRVKKKDPE PKSQDVVVSP SEDSKKGGGG  180
GDEKKLFQRL WSDENEIELL KGMLDYTALR GADPAADAAA FFEFVKKSLH VEVTKAQLVD  240
KMKRLRKKYN NNAGRGKKGK DPTFSKPHEQ KTYELSKKIW GSVEAATETE KAKDINNGKA  300
KAKDNKNGKA KAKDNNNNNK NQKGNSLIRS LKEELTESSP VLYKYGEKME IDGDSGSGSC  360
LNGMLRFHKN VWLDERVIKR GLKLIDEEKK VELEERWKEV ELAELEVYVK QTELIKDQAR  420
LILEAYKDH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	7e-29	GeBP family protein