PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023876529.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 237aa MW: 27156.6 Da PI: 6.9094 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104.3 | 7.4e-33 | 30 | 83 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt+eLH+ Fveave+LGG++kAtPk+il++m+vkgLt++hvkSHLQ+YR+ XP_023876529.1 30 PRLRWTTELHDLFVEAVEHLGGKDKATPKRILQMMSVKGLTISHVKSHLQMYRS 83 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 59.6 | 6.9e-19 | 31 | 82 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTte+++l+v+av+ lGg+ t+k+I ++m kg+t ++ks++q+y+ XP_023876529.1 31 RLRWTTELHDLFVEAVEHLGGKdkaTPKRILQMMSvKGLTISHVKSHLQMYR 82 89************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MSFLISHQLQ KMKNSDRIGS VRQYNKSELP RLRWTTELHD LFVEAVEHLG GKDKATPKRI 60 LQMMSVKGLT ISHVKSHLQM YRSMKDRSNI SVLVPTKHYL RERKAHSKDL RTFSVCSPQR 120 PLGGELRQGE YDSRDFGQEI FSEDSNRLLQ TMEETSNRHQ DTNTCLVCSM SNETSGPDEI 180 CELSLSSATP AMHSVEEREF WPLTDYNIPD SSSLNEFINI PHFHSLGSSS INLDLTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40260.1 | 1e-28 | G2-like family protein |