PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023876528.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | G2-like | ||||||||
Protein Properties | Length: 243aa MW: 27773.3 Da PI: 6.584 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.7 | 6.3e-29 | 30 | 89 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsek......AtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt+eLH+ Fveave+LGG+++ AtPk+il++m+vkgLt++hvkSHLQ+YR+ XP_023876528.1 30 PRLRWTTELHDLFVEAVEHLGGKDNilgfaeATPKRILQMMSVKGLTISHVKSHLQMYRS 89 8********************9985555555****************************7 PP | |||||||
2 | Myb_DNA-binding | 58.6 | 1.4e-18 | 31 | 88 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.........-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.........tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTte+++l+v+av+ lGg+ t+k+I ++m kg+t ++ks++q+y+ XP_023876528.1 31 RLRWTTELHDLFVEAVEHLGGKdnilgfaeaTPKRILQMMSvKGLTISHVKSHLQMYR 88 89******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MSFLISHQLQ KMKNSDRIGS VRQYNKSELP RLRWTTELHD LFVEAVEHLG GKDNILGFAE 60 ATPKRILQMM SVKGLTISHV KSHLQMYRSM KDRSNISVLV PTKHYLRERK AHSKDLRTFS 120 VCSPQRPLGG ELRQGEYDSR DFGQEIFSED SNRLLQTMEE TSNRHQDTNT CLVCSMSNET 180 SGPDEICELS LSSATPAMHS VEEREFWPLT DYNIPDSSSL NEFINIPHFH SLGSSSINLD 240 LTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 8e-26 | G2-like family protein |