PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875995.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 74aa    MW: 8492.14 Da    PI: 4.1057
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-102567145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++++E+ l+ + +++ G + W++Ia +++ gRt++++  +w 
   XP_023875995.1 25 KLEFSEDEETLITRMFNLVGER-WTLIAGRIP-GRTAEEIEKYWT 67
                     678*******************.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MADLDHTSDE SSVDSRGESN SQDSKLEFSE DEETLITRMF NLVGERWTLI AGRIPGRTAE  60
EIEKYWTSRY STSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.11e-18MYB_related family protein