PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023875994.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 76aa    MW: 8662.35 Da    PI: 4.1057
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023875994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.91.5e-102769145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ ++++E+ l+ + +++ G + W++Ia +++ gRt++++  +w 
   XP_023875994.1 27 KLEFSEDEETLITRMFNLVGER-WTLIAGRIP-GRTAEEIEKYWT 69
                     678*******************.*********.***********5 PP

Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    
MADLDHTSDE SSVDSRVAGE SNSQDSKLEF SEDEETLITR MFNLVGERWT LIAGRIPGRT  60
AEEIEKYWTS RYSTSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.12e-18MYB_related family protein