PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023875911.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 243aa MW: 27313.8 Da PI: 5.1238 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.7 | 8.4e-13 | 4 | 61 | 38 | 99 |
EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 l+ ++g +W+vkl +k++g++++++GW eF++ + L g +vF+++g+s f ++ +f++ XP_023875911.1 4 LMIPNGTKWKVKL--TKRDGEVWFQNGWCEFASCHTLTMGHLLVFRYEGNSHF--YILIFDA 61 56689********..**********************************9999..9999986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MAFLMIPNGT KWKVKLTKRD GEVWFQNGWC EFASCHTLTM GHLLVFRYEG NSHFYILIFD 60 ATAIEIDYPL DDQLQVCWME DNESDDDSLE IMDGFTRGEG SRSAHGVGGN RVGCKTSPLV 120 KPESDCNMDD VSSSHDQCPK KDGDVDENLV RANAFNSENP LFTVIIHPSY INGKDHASLP 180 HGIINYLPRE GFIKDYTKGS ILAMKLQVVD RLWHVKLYVY ERSMGSSCVV SAGCSAFARE 240 NTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-22 | B3 family protein |