PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023875247.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 363aa MW: 41248.4 Da PI: 8.2069

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023875247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43	7.9e-14	262	360	7	98
.-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 7 psdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 ps+ + ++ +lp + + ++ ++ k ++ t++le r W +kl iy++k +++v +GW+ F+++n L++gD++vF+l+ r++ + XP_023875247.1 262 PSYINGKDHASLPYSII-NYllregftmDYTKGSTLTVKLEV-VDRFWPMKLyIYEGKYSSCVVFAGWSAFARDNTLRVGDVCVFELNMRDDVVF 354 66666666677777777.555666665544444444455444.5699**966688888878888*******************98888878 PP EEEEE- CS B3 93 vvkvfr 98 +v++fr XP_023875247.1 355 KVHIFR 360 999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MDGIKNVNPD AYDYLMEVAQ EKWTLVHDHG HRYGAMTTNL LKCFNGALKG THSLPIIAMV 60 QFTFYKLAFM FKFFFLQRIP KKFISEYGVD LSDMAFLTIP NAFRYEGNSQ FSVLIFDATA 120 TKVDYPAVEL QVRRMEDNES DDNSIEIIDG FMPSRETGKK PPVPCLLPHK RAKTNPSMLE 180 KSKRQFGVSF TRGESSGLAH GVGRNRVGCK SSSLVKLESD CNLDESFSHD HCPKKDGGVA 240 KNHVRANALK SENPLFMVII HPSYINGKDH ASLPYSIINY LLREGFTMDY TKGSTLTVKL 300 EVVDRFWPMK LYIYEGKYSS CVVFAGWSAF ARDNTLRVGD VCVFELNMRD DVVFKVHIFR 360 CLD

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MDGIKNVNPD AYDYLMEVAQ EKWTLVHDHG HRYGAMTTNL LKCFNGALKG THSLPIIAMV  60
QFTFYKLAFM FKFFFLQRIP KKFISEYGVD LSDMAFLTIP NAFRYEGNSQ FSVLIFDATA  120
TKVDYPAVEL QVRRMEDNES DDNSIEIIDG FMPSRETGKK PPVPCLLPHK RAKTNPSMLE  180
KSKRQFGVSF TRGESSGLAH GVGRNRVGCK SSSLVKLESD CNLDESFSHD HCPKKDGGVA  240
KNHVRANALK SENPLFMVII HPSYINGKDH ASLPYSIINY LLREGFTMDY TKGSTLTVKL  300
EVVDRFWPMK LYIYEGKYSS CVVFAGWSAF ARDNTLRVGD VCVFELNMRD DVVFKVHIFR  360
CLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-18	B3 family protein