PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023875066.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 579aa MW: 63027.6 Da PI: 6.8392

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023875066.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.2	9.2e-30	229	288	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+++v+r+a+d +++++tYeg+Hnh+ XP_023875066.1 229 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRRQVQRCAQDMTILITTYEGTHNHP 288 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MEAAKERSSH GGEVSEEKRN ESSAHEEGCK EENTVIKVPP MGGSLKEPDS TSSTSRKEQD 60 DQLQSARAEM GEMREENQRL KKFLDRMMKD YQTLEMKFRD IVQQEGRKSM DTANKHQEIE 120 EPEFVSLRLG RTLSDTKKEE KVNVVSTQWK EDEETKEGLS LGLDYKLELS KSIENQSPVN 180 SSEEVKEEAR ETWAPSKALK RSGDDEAPQQ NPVKKARVCV RARCDTPTMN DGCQWRKYGQ 240 KIAKGNPCPR AYYRCTVAPS CPVRRQVQRC AQDMTILITT YEGTHNHPLP MSATAMASTT 300 SAAASMLLSG SSSSSQLPGH NSLATSGLNY YLSDDIKSKQ FYLPNNSPFS SSVPSCPTIT 360 LDLTSAPSSS SSTHFNRLSS NYPPRYSSTS LNFSSSESNA VSWANGFLSY GSTQPSYNRN 420 QIGNLPIGSQ IENSIYQSYM QKTNPTPPQH SQQENSAIAA ATKAITADPS FQSALVAALS 480 SIMGTGGTAA SGGALGNHGG GDNNFGQKSR WGSELFQAPS TTFPASPPKG NGCASNFLNE 540 TQSMTNSQPG SLMFLPPSLP LSTSKSASAS PSDNRDHTN

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MEAAKERSSH GGEVSEEKRN ESSAHEEGCK EENTVIKVPP MGGSLKEPDS TSSTSRKEQD  60
DQLQSARAEM GEMREENQRL KKFLDRMMKD YQTLEMKFRD IVQQEGRKSM DTANKHQEIE  120
EPEFVSLRLG RTLSDTKKEE KVNVVSTQWK EDEETKEGLS LGLDYKLELS KSIENQSPVN  180
SSEEVKEEAR ETWAPSKALK RSGDDEAPQQ NPVKKARVCV RARCDTPTMN DGCQWRKYGQ  240
KIAKGNPCPR AYYRCTVAPS CPVRRQVQRC AQDMTILITT YEGTHNHPLP MSATAMASTT  300
SAAASMLLSG SSSSSQLPGH NSLATSGLNY YLSDDIKSKQ FYLPNNSPFS SSVPSCPTIT  360
LDLTSAPSSS SSTHFNRLSS NYPPRYSSTS LNFSSSESNA VSWANGFLSY GSTQPSYNRN  420
QIGNLPIGSQ IENSIYQSYM QKTNPTPPQH SQQENSAIAA ATKAITADPS FQSALVAALS  480
SIMGTGGTAA SGGALGNHGG GDNNFGQKSR WGSELFQAPS TTFPASPPKG NGCASNFLNE  540
TQSMTNSQPG SLMFLPPSLP LSTSKSASAS PSDNRDHTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-77	WRKY family protein