PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023874761.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 222aa MW: 25462.8 Da PI: 6.5247 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 37 | 88 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++f++eq++ Le +Fe+++ p +++++LA++lgL rqV +WFqNrRa+ k XP_023874761.1 37 QRFNDEQIKLLEIMFEEESRPESRTKQKLANELGLHPRQVATWFQNRRARLK 88 78************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 101.7 | 6.2e-33 | 36 | 126 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +r+++eq+klLE +Feee++ e++ K++la+eLgl+prqva WFqnrRAR ktkq+E++y+ Lk++yd+l+++ e+L++e++ L +l++ XP_023874761.1 36 MQRFNDEQIKLLEIMFEEESRPESRTKQKLANELGLHPRQVATWFQNRRARLKTKQIEREYSLLKASYDTLASKFESLKRENQLLLLQLQK 126 579********************************************************************************99988876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 222 aa Download sequence |
MLAKEKVCII IKKKKCALIA IESSHAMASK RKNKNMQRFN DEQIKLLEIM FEEESRPESR 60 TKQKLANELG LHPRQVATWF QNRRARLKTK QIEREYSLLK ASYDTLASKF ESLKRENQLL 120 LLQLQKLKDM LDKQHGKNGI SDSNSVKGDS TSESKEKPSI LSESVNHNIN MFIGDANCED 180 AECTEEETGM LNIAEPIDDS STSSEDWCSF LDQSSGNSQW WE |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 83 | 91 | RRARLKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46680.2 | 3e-36 | HD-ZIP family protein |