PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874603.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 422aa MW: 45373.5 Da PI: 9.5388

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.6	4.4e-13	341	391	1	52
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIk 52 +r++h + E++RR+ i+++++ L +++P+ a +++ lsKae L++A+ YI XP_023874603.1 341 KRENHIKSEQKRRNIIKQGYNDLNRMVPNlA---GGRSgLSKAELLKEAIMYIE 391 79*************************55...77778************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MFANHFGSAP SGGHRSQSHS TNYYPSGQGL IGGAYDDSSA AHSLVGMSNP QHSHAAMSWG 60 NFSAPNGLPE ASTGYTSTLP NFNASNIRTS NHYSEPPGFA LNQQVYHQDA SQHLAQSSRT 120 PQPRYQDPPN FFQFGNVETP TPSTAPRTSN LGALEARFGT DDSFGSSGYR GSIRSTEHEK 180 YANLNSMPMA DRAAAYTPAG GPLALQRRES AYDANTGGER SQSAKRRKTK VETEDDDYLP 240 EGRSSAAAQK RGQKSLTNVE TSHAMPNKNE GSRRKSVPNV GSARPPSTVR SYNDDSGSPD 300 VMGSLSPGDS GDMSSTKKRQ RVRGSDVGAA SGRQNLSDQQ KRENHIKSEQ KRRNIIKQGY 360 NDLNRMVPNL AGGRSGLSKA ELLKEAIMYI EECVMGNKAL AHLLPTTDKL EDATIGANGI 420 SS

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MFANHFGSAP SGGHRSQSHS TNYYPSGQGL IGGAYDDSSA AHSLVGMSNP QHSHAAMSWG  60
NFSAPNGLPE ASTGYTSTLP NFNASNIRTS NHYSEPPGFA LNQQVYHQDA SQHLAQSSRT  120
PQPRYQDPPN FFQFGNVETP TPSTAPRTSN LGALEARFGT DDSFGSSGYR GSIRSTEHEK  180
YANLNSMPMA DRAAAYTPAG GPLALQRRES AYDANTGGER SQSAKRRKTK VETEDDDYLP  240
EGRSSAAAQK RGQKSLTNVE TSHAMPNKNE GSRRKSVPNV GSARPPSTVR SYNDDSGSPD  300
VMGSLSPGDS GDMSSTKKRQ RVRGSDVGAA SGRQNLSDQQ KRENHIKSEQ KRRNIIKQGY  360
NDLNRMVPNL AGGRSGLSKA ELLKEAIMYI EECVMGNKAL AHLLPTTDKL EDATIGANGI  420
SS