PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874522.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 579aa MW: 62941.1 Da PI: 7.6524

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874522.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.5	8.7e-31	241	299	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed++++++tYeg+Hnh+ XP_023874522.1 241 NDGCQWRKYGQKIAKGNPCPRAYYRCTVApDCPVRKQVQRCAEDTSILITTYEGNHNHP 299 8*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MNCMSKMPSS CGEAKEEKSF ESTCNHENQE ARQGKSRREI LLEMGSLNQS SPQYMASGNV 60 KKENELESAK AEMGEVKEEN ERLKMMLQQI EKDYQSLQLR FFDIIKQETP NNFTESSTPS 120 HDETEEPELV SLCLGRSPTE PKKEEKASNP AKISTKDEEL KASRLSLGWD SNKFQLSTEI 180 VSDPSPETSL EETKQAEAGE TWPPSKTLKT MRNGGDEVSQ QTHVKRARVS VRARCETPTL 240 NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP DCPVRKQVQR CAEDTSILIT TYEGNHNHPL 300 PATATAMAST TSAAASMLLS SSSMSKPGLG STASTAAAPV PNGLHFNPLD NSRAKQFYLP 360 NSSSPLLPTV TLDLTTSPPS SSTPFNRLSS SFASNPRFPS TSLSFSSSQS NILPTAWGNG 420 YPSFNSVPYN KTHTGGSLNM GKQSQEQQLS YQSYLEKYHQ ASSQETLTDN LAKAIASDAS 480 FRSVIAATIS SMVGGRPTPG SNQGGGERLG QNMKWSEPIQ AVSTDSLTQN GKACASSYFN 540 RLASSPSQTS GLMLLRPPLP LSISKSTPTS TSAIGDQIN

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MNCMSKMPSS CGEAKEEKSF ESTCNHENQE ARQGKSRREI LLEMGSLNQS SPQYMASGNV  60
KKENELESAK AEMGEVKEEN ERLKMMLQQI EKDYQSLQLR FFDIIKQETP NNFTESSTPS  120
HDETEEPELV SLCLGRSPTE PKKEEKASNP AKISTKDEEL KASRLSLGWD SNKFQLSTEI  180
VSDPSPETSL EETKQAEAGE TWPPSKTLKT MRNGGDEVSQ QTHVKRARVS VRARCETPTL  240
NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP DCPVRKQVQR CAEDTSILIT TYEGNHNHPL  300
PATATAMAST TSAAASMLLS SSSMSKPGLG STASTAAAPV PNGLHFNPLD NSRAKQFYLP  360
NSSSPLLPTV TLDLTTSPPS SSTPFNRLSS SFASNPRFPS TSLSFSSSQS NILPTAWGNG  420
YPSFNSVPYN KTHTGGSLNM GKQSQEQQLS YQSYLEKYHQ ASSQETLTDN LAKAIASDAS  480
FRSVIAATIS SMVGGRPTPG SNQGGGERLG QNMKWSEPIQ AVSTDSLTQN GKACASSYFN  540
RLASSPSQTS GLMLLRPPLP LSISKSTPTS TSAIGDQIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	6e-95	WRKY family protein