PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023874430.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 387aa    MW: 42330.4 Da    PI: 7.0326
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023874430.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.8e-21186236256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+ge
  XP_023874430.1 186 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAFKLRGE 236
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MAAAIGIYNS SSTSNFSDPG EELMIALQPF MKGASPTSSL TLSSYSSSSP PTSPSTSSSS  60
SFTSYPSCSY STNSPSQPNL YPEFCSPSST QMFCRGFSSH NNQMGLEQQT GTIGLNHLTP  120
YQILQIQAQV QLQQQQQQIA ALASASLQTQ RLNQWQHQKA NNLNFHLGPK AVPMKHVGTP  180
PKPTKLYRGV RQRHWGKWVA EIRLPKNRTR LWLGTFDTAE EAALAYDKAA FKLRGEFARL  240
NFPHLKHQGA HISGEFGDYK PLHSSVDAKL QAICQSLANS QKQGKTEDPC FVSDTKPTIP  300
IPPAPSNANS VCDGLPKLEL KKEIGFLGVE DCKVENSLSS SSDDSSSLAG SCSPESDISF  360
LEFPKWDETE NFGLDKFPSV EIDWAAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.13e-58ERF family protein