PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023874392.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 270aa    MW: 31125.5 Da    PI: 8.8001
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023874392.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.16.7e-1819101999
                     HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     +  ++  +++p kf+++  ++   + + +l+ +sg++W vkl  +k+ ++++l++GW++F +++ L +++ ++F+++g+ +f  +v++f k
  XP_023874392.1  19 H--TTESMRIPPKFVKHLPIE--LPDQAILKGPSGEKWHVKL--CKTEDGIYLKDGWQRFFQDHSLGDNEWLLFRYNGDLCF--NVHIFGK 101
                     3..34459*******555433..6678***************..**********************************9999..9999876 PP
2B363.63.1e-20178267297
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fk  +++++  + + ++p  fa++h  + +++++++l +++ +sWe+++   ++++ + +++GW++Fv++n+Lk+gD++vF+l+   + e +v+v
  XP_023874392.1 178 FKCCMNKSSVVEFLQTVPTIFARNHL-P-QRNTKIILWNSEDKSWEMNY--INNGKNHKFSGGWRDFVRDNKLKVGDTCVFELVA--KNEIRVHV 266
                     56666777777778899*****9995.3.36779***************..88888999***********************987..44457877 PP

                     E CS
              B3  97 f 97 
                     f
  XP_023874392.1 267 F 267
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MDEFLDNRPS FFKIIFEGHT TESMRIPPKF VKHLPIELPD QAILKGPSGE KWHVKLCKTE  60
DGIYLKDGWQ RFFQDHSLGD NEWLLFRYNG DLCFNVHIFG KNGCERVDAS STKANHETAS  120
SSGKRPRGRP RKTPHGLVPL QESKPCKVIL GQQCNSIETN QSKICKVADS FTSDFPYFKC  180
CMNKSSVVEF LQTVPTIFAR NHLPQRNTKI ILWNSEDKSW EMNYINNGKN HKFSGGWRDF  240
VRDNKLKVGD TCVFELVAKN EIRVHVFPVD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124132KRPRGRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.18e-30B3 family protein