PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023874307.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | B3 | ||||||||
Protein Properties | Length: 189aa MW: 21529.8 Da PI: 6.235 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.3 | 3.6e-10 | 141 | 180 | 58 | 97 |
EEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 58 ryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++ + kGW +F k+n+L+egD++vF++++++ l v +f XP_023874307.1 141 AMRFVKGWVGFSKDNNLEEGDVCVFEVIEKKPVVLSVLIF 180 456789********************99877777777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MVDTSPPKLM HKLFRDALCI HVSMDGYLWS RFNSAELSTV ATLIASYGVF RYEGNSSFRV 60 LIFDKTITGI QYPPSKNCKL EDHHVEIIDL NEDDTNISPS DDLPTKHEYV PAKFSTKYII 120 RKQVVTLQCL VLLPPIKTYS AMRFVKGWVG FSKDNNLEEG DVCVFEVIEK KPVVLSVLIF 180 QVVDHQSLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49480.1 | 4e-10 | B3 family protein |