PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023874265.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 216aa    MW: 23904.8 Da    PI: 8.6356
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023874265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.2e-213281255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  XP_023874265.1 32 KYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAALSLRG 81
                    8********.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MRRRAPTTAD PTKTTTFNQF IRTSTDNNNN VKYRGVRKRP WGRFAAEIRD PWKKTRVWLG  60
TFDSAEDAAR AYDAAALSLR GPKAKINFPL TAPQLATLPA IRDEQPRFSS SAGTKFNPIQ  120
PNRPTTSSMS STVESFSGPR VVSNPVSRVK IVNPVAPDDC RSDCDSSSSV VDDDNDDYCV  180
LTSSFRKIQP FDLNLPPPMD EDFGIADDLQ ATALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.12e-21ERF family protein