PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023874229.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 720aa    MW: 81795 Da    PI: 8.2792
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023874229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.71.4e-1548132696
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +  +  + + l++p+kf++++g +   s   tl  +sgr W v+l  rk +++ ++ +GW eFvk + + +g  ++F+++g+s+f   + +
  XP_023874229.1  48 MDVSIIQDKKLRVPNKFVRKFGDE--LSSVATLSVPSGRDWLVEL--RKADQKLWFHDGWHEFVKHHCIHAGNLLIFRYEGNSNF--DIYI 132
                     55666677889**********865..7779999************..**********************************9999..5555 PP
2B334.82.9e-113624431094
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE..EE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgrsefelvv 94 
                     v+++++l+lp  f++++g +       t+++++gr+W++ l   k  +++++++GW +F + + +   g +++Fk++g+s+f+ ++
  XP_023874229.1 362 VFNEKILRLPEIFLQKFGDQ--LASIATVNSPNGRVWQLSL--GKDENGTWFSDGWDKFLDYHSISsNGHIIIFKYEGNSTFNVLF 443
                     678899**********9877..4458999************..99999*****************989**********99997665 PP
3B349.86.4e-16619714199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffk+ ++ ++  ++ +++p  fa ++  +  e   + l+d++g+++  ++  r +sg+   ++kGW  F+++++L+egD++vF+l++r+   l v
  XP_023874229.1 619 FFKAILRRHNIYNSFVYVPAGFAMKYL-P-SE--SIALQDSNGKRFPARCFDREGSGAgRSIGKGWATFAREHDLEEGDVLVFELINREAIVLEV 709
                     89999999***************9994.3.23..5***************55555555799*************************999999*** PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++fr+
  XP_023874229.1 710 HIFRA 714
                     **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 720 aa     Download sequence    
MMINDHGLAL PVTESEQSKS TMAQLVNQSL HSSSPCPNRR ACLFYKLMDV SIIQDKKLRV  60
PNKFVRKFGD ELSSVATLSV PSGRDWLVEL RKADQKLWFH DGWHEFVKHH CIHAGNLLIF  120
RYEGNSNFDI YIFNLTACES CNIPSCSEEP HHVKQCPVSL GKVADNASIE ILGAEEPSHG  180
KHHPVLHGKE IEDDDSIEFL GSFPPRPTSM PWRNNVSDER VDQQKLYKSC IRTALKNLMH  240
RPDGDNIHLA KDADTLKAKV QSTREIGIQF NESELTRTAG EVGSGYWDEA RQSAKRRKQT  300
EFNVEVGMPG AKVSIAVAEK RGRAIRAALR PRTRCRGVEP TDKCERRCKY PTRDPETFFK  360
IVFNEKILRL PEIFLQKFGD QLASIATVNS PNGRVWQLSL GKDENGTWFS DGWDKFLDYH  420
SISSNGHIII FKYEGNSTFN VLFMFDMTAG KIDYPIDNLS SDAEPDSVPN EEEEKHFGYN  480
DVSVSTTYNP SQNSSESWTS DEYFSQGVLK KRNKYTTWTD RKKRHIRKGA CSSGQATTQS  540
CDKCGHHKES EFAKFDNEES EKTPKEGRFY SSGKRNPKSK YKVDDFSATS GFSKFSKTIQ  600
AAKKRARKAA DMFQSEHPFF KAILRRHNIY NSFVYVPAGF AMKYLPSESI ALQDSNGKRF  660
PARCFDREGS GAGRSIGKGW ATFAREHDLE EGDVLVFELI NREAIVLEVH IFRAIDYSGM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1509528LKKRNKYTTWTDRKKRHIRK
2510523KKRNKYTTWTDRKK
3510524KKRNKYTTWTDRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-33B3 family protein