PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023874181.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 341aa    MW: 37673.2 Da    PI: 9.2412
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023874181.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.7e-1368112147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_023874181.1  68 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 112
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MLSVNPNPAA QGFHLFDPMN MGFNSLPPPT TTTTTTATST NNNNNNTASL LDDPSKKIRK  60
PYTITKSRES WTEQEHDKFL EALQLFDRDW KKIEAFVGSK TVIQIRSHAQ KYFLKVQKSG  120
ASEHVPPPRP KRKAAHPYPQ KAPKNAPVVS QATGQYQSSS VMLEPASYVY RPDSSSVLGN  180
PMNSSAVSSW SFNSMPPVTV SQATKDDAGL AGPTIAQNCC YSSSNESMPP KTWPTGEKIN  240
RGDHGNTARV MPDFAQVYSF IGSVFDPNST GHLQRLKQMD RINLETVMLL MRNLCVNLTS  300
PEFEDHRRLL SSYDADPEKG KSGSPHTNFH TDHSQSAILS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01280.12e-89MYB_related family protein