PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023874115.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 114aa MW: 12866 Da PI: 11.113 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.3 | 2.4e-10 | 7 | 51 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++W+++Ed+ l+ av++ G g+W+ I r Rt+ q+ rw XP_023874115.1 7 RKPWSEDEDLELIAAVQKCGEGNWANILRGDFkGDRTATQLSQRW 51 79*************************984223589999998888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MPLRRKRKPW SEDEDLELIA AVQKCGEGNW ANILRGDFKG DRTATQLSQR WAIIRKRRGI 60 LNVGTNPSGS QLSEERRAAH HAISLALMPV KSLTAARPGN LFSILIYLTL LKYL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 9 | LRRKRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09710.2 | 4e-29 | MYB_related family protein |