PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023873007.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 577aa MW: 64727.2 Da PI: 6.9475

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023873007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	129	148	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +Cp Cg F r +L++H+ XP_023873007.1 129 TCPGCGSYFIRAALLVQHLE 148 7*****************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MPIMKGSGKE TGELLPVKCT YPECLHHFAT QKEMKRHKTK DPEHDYCKKC NVDCDDWESF 60 VQHKIDAMSP WLEGEMIPYA RDYCNPDDDE NELPVPKHIV CEFCGADFKT FGGRKAHRAQ 120 EHPADQSITC PGCGSYFIRA ALLVQHLENG ECSVITRNEF LGSIRQKHFL KEVFKAPDEY 180 VAGLQMNKAA SLGIEVIPRA PALNIDYLSM NDDDEGLSLL RDEVIATQGV DQMTGSDADL 240 IDIDPPSTAD DKHYGSYSRA NDQKWPKLPG LQAVSGSRRP GSTAKGSSPE HVGSDSRDEA 300 SAHTGRTGGV KVDITSYPSR CYAAAVKSGH ATNPRSSTVE TRDMTNAGDN DRVSKRLTKE 360 NVKALPKAKA GDWSSFTKMK EKMMQDHKKD NLFYVHWWDP TSEDYNVDRF LAYIEVPKLD 420 SRTGKIVVDP KTNSPIVESV VWKYCCPDPD CKFRFDNSAE FELHWLYGHG QLQWRCPCCL 480 KLFKSVTSLI RHCESYTKCG VKHSDEFARV SRYPLLKTDS TLTPSQFLSD VTGGFLKSKR 540 CKEPIIFRHN KALAVAGEPT INGMMPVQFT AKMPGDQ

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MPIMKGSGKE TGELLPVKCT YPECLHHFAT QKEMKRHKTK DPEHDYCKKC NVDCDDWESF  60
VQHKIDAMSP WLEGEMIPYA RDYCNPDDDE NELPVPKHIV CEFCGADFKT FGGRKAHRAQ  120
EHPADQSITC PGCGSYFIRA ALLVQHLENG ECSVITRNEF LGSIRQKHFL KEVFKAPDEY  180
VAGLQMNKAA SLGIEVIPRA PALNIDYLSM NDDDEGLSLL RDEVIATQGV DQMTGSDADL  240
IDIDPPSTAD DKHYGSYSRA NDQKWPKLPG LQAVSGSRRP GSTAKGSSPE HVGSDSRDEA  300
SAHTGRTGGV KVDITSYPSR CYAAAVKSGH ATNPRSSTVE TRDMTNAGDN DRVSKRLTKE  360
NVKALPKAKA GDWSSFTKMK EKMMQDHKKD NLFYVHWWDP TSEDYNVDRF LAYIEVPKLD  420
SRTGKIVVDP KTNSPIVESV VWKYCCPDPD CKFRFDNSAE FELHWLYGHG QLQWRCPCCL  480
KLFKSVTSLI RHCESYTKCG VKHSDEFARV SRYPLLKTDS TLTPSQFLSD VTGGFLKSKR  540
CKEPIIFRHN KALAVAGEPT INGMMPVQFT AKMPGDQ