PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023872925.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GRF

Protein Properties

Length: 400aa MW: 45262 Da PI: 8.203

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023872925.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78	9.5e-25	79	122	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrg++rsrk++e XP_023872925.1 79 DPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGKNRSRKPVE 122 79***************************************987 PP
2	QLQ	55.2	2.1e-19	8	42	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +F+a+Q+q+L++Q+l++Ky+a++ P+Pp+Ll i+ XP_023872925.1 8 PFSASQWQELEHQALIFKYMASGIPIPPDLLYTIK 42 8*****************************97765 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MSARNRFPFS ASQWQELEHQ ALIFKYMASG IPIPPDLLYT IKRSCLDSSV SSKFFPHQPH 60 QHVGLGWNCL QMGLGRKIDP EPGRCRRTDG KKWRCSKEAF PDSKYCERHM HRGKNRSRKP 120 VEVLKTTTTT SSSSTTTTNP STSTISSITK NHSAALTPTT HYPHPFSSLS SMSSSDTHHS 180 HLHHSYYTNS TPPHHRFLYH NPTSSSRTPG IGLSPRDNNT TPLLLESSPY SQTNTDFRYI 240 YGLKEEVDEH AFFSEPSGTM RSLSGPLSMD DPWQLTPLTM STSSSKQRSC SGLQNQSDYS 300 SHLQLQSLSD STTKQSEEDQ HFFVLGSDIK LMEKEQPQPQ KTIHHFFDEW PPKERDSWVD 360 QLDDKSSNSS SVSTTRLSIS IPNSSHHDFP IFSSRTHNDG

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MSARNRFPFS ASQWQELEHQ ALIFKYMASG IPIPPDLLYT IKRSCLDSSV SSKFFPHQPH  60
QHVGLGWNCL QMGLGRKIDP EPGRCRRTDG KKWRCSKEAF PDSKYCERHM HRGKNRSRKP  120
VEVLKTTTTT SSSSTTTTNP STSTISSITK NHSAALTPTT HYPHPFSSLS SMSSSDTHHS  180
HLHHSYYTNS TPPHHRFLYH NPTSSSRTPG IGLSPRDNNT TPLLLESSPY SQTNTDFRYI  240
YGLKEEVDEH AFFSEPSGTM RSLSGPLSMD DPWQLTPLTM STSSSKQRSC SGLQNQSDYS  300
SHLQLQSLSD STTKQSEEDQ HFFVLGSDIK LMEKEQPQPQ KTIHHFFDEW PPKERDSWVD  360
QLDDKSSNSS SVSTTRLSIS IPNSSHHDFP IFSSRTHNDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	7e-54	GRF family protein