PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023872642.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | GeBP | ||||||||
Protein Properties | Length: 155aa MW: 17693.2 Da PI: 8.9072 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 41.5 | 3.6e-13 | 2 | 53 | 46 | 97 |
DUF573 46 sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 s +++ksql+eK+rrL+kKf+ +++ ++g +ps+ ++hd f+lsk++W XP_023872642.1 2 SQTYTKSQLSEKLRRLRKKFRVISARLARGLNPSMLSPHDCALFDLSKSLWS 53 7789***********************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MSQTYTKSQL SEKLRRLRKK FRVISARLAR GLNPSMLSPH DCALFDLSKS LWSPQIQSFD 60 ANAADDNDDE EENEEFCGGL GMGVVGAKAV LDVFDQCLKE VRAVLVRRGL LLSDNSKSSS 120 KAMDFERRWQ EQRVAELDVF ARRLRLVLDN SLRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 1e-09 | GeBP family protein |