PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872526.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NAC
Protein Properties Length: 448aa    MW: 48587.5 Da    PI: 4.412
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872526.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.11.1e-1624980128
             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g+ katgkd+e++s +g+l+g+kktLv+++gr+p+ge t+Wvmheyr 
  XP_023872526.1   2 EGFYKATGKDREIKS-RGSLIGMKKTLVYHRGRTPNGEGTKWVMHEYRT 49 
                     699************.999****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MEGFYKATGK DREIKSRGSL IGMKKTLVYH RGRTPNGEGT KWVMHEYRTT QDEFDGTHPG  60
QKAFVLCRLF NNEEKTNKGG SAKSKPALAP LSPALEVQVE THQTSIQSCY SEISDEMMSD  120
VAKNQAAEVT STEVGFNLEQ SSNMFNVLSP GDSPPSLSPI APVVLTPNVS EDSTLINPLN  180
DPDEFFHNTS CSQNNLAVDN ETLKSMASFK DNGSCSGSDA NAQVDQVTSV TPAVSSPTIA  240
EASLKEAESM LAPASVPQEL GSGADNYPPS FRFSTAKNSD GIISNTKTPI EYKNDGYNTS  300
VDRNQVEVVT SDEVEACSNM FSVSKEPLVS NMYSPLHSQV QAELYSSCTY HLSANDCHWG  360
VYDQYGTNEP DPIISESRDS IYKPDVYLRN ASLSQNNLAV DDETVKNMAS FLDNGSCGGS  420
GVNAQSGQEY QGLVRFEEVI KPKVSSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-27NAC family protein