PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023872479.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 698aa MW: 81667.5 Da PI: 8.5117

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023872479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.2e-22	116	204	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYne +++ GFs++k+ +k+k++g +t+r+f+C keg++++ +++ +++ +r+etrtgC+a++ ++++k +gk+ +++lel+HnH l XP_023872479.1 116 DFYNECGRNFGFSIQKEWCHKRKKDGVVTSRKFTCCKEGNKTPWERD-GENKYERVETRTGCNAHMIIRLDKkKGKYFIHSLELNHNHIL 204 6*****************************************999.99999**************99*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MRTKTQNPCK TQDPYPSILP SHKRAIFKRS KPKTHASNLQ AKTSNLQSET SNHQDPRKRS 60 TSENEQSSPL PLPTELLRWE RGHYIEEENN DDSQKLDTDY IPKLGIEFGF EQEAYDFYNE 120 CGRNFGFSIQ KEWCHKRKKD GVVTSRKFTC CKEGNKTPWE RDGENKYERV ETRTGCNAHM 180 IIRLDKKKGK YFIHSLELNH NHILHIPQCA HMMPSQQKVS KAQAMEIDLA YDSGIKLKDS 240 YEFMARQVGG RDAFCYTKQD QKNYHYSKRK KEQKCGKAGS LFKYFQKQRK ENPSFYYAVQ 300 LDASKLITNI FWADAQMIVD YKLFGDVVSF DTTYRTNKEY RPLAMFVGFN HHRESTIFGA 360 VLLYDETIDT FHWLFEAFFE AMSRKKPNTI CTDQDPAMAK AISLVMPNTY HRLCKWHLMQ 420 NALKGLNHLL RGEDEFRSDL DACFKIWEEE EEFLSAWDAI LHKYNAFDNS WLQSAFEVKE 480 KWAKAYVKMS FSAGMTITQL SESINSDLKD YLQSDYDIVK FFIHFERLLD AKRYKELKGE 540 YNLRQKLPKV KIASPMVIQA AHIYTPKLFL KFQEQYEEFQ GAFVKERVER NATHEYIVSI 600 YGKPKDRRDK HLTSSMQVNE VISYNHLPYI DHSAQGKSIR NDQEQSSFGT FENLVNFYGM 660 TNPYVPLPCS KNPSDLEGDD ISSLLTKFTT GKIEAFST

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MRTKTQNPCK TQDPYPSILP SHKRAIFKRS KPKTHASNLQ AKTSNLQSET SNHQDPRKRS  60
TSENEQSSPL PLPTELLRWE RGHYIEEENN DDSQKLDTDY IPKLGIEFGF EQEAYDFYNE  120
CGRNFGFSIQ KEWCHKRKKD GVVTSRKFTC CKEGNKTPWE RDGENKYERV ETRTGCNAHM  180
IIRLDKKKGK YFIHSLELNH NHILHIPQCA HMMPSQQKVS KAQAMEIDLA YDSGIKLKDS  240
YEFMARQVGG RDAFCYTKQD QKNYHYSKRK KEQKCGKAGS LFKYFQKQRK ENPSFYYAVQ  300
LDASKLITNI FWADAQMIVD YKLFGDVVSF DTTYRTNKEY RPLAMFVGFN HHRESTIFGA  360
VLLYDETIDT FHWLFEAFFE AMSRKKPNTI CTDQDPAMAK AISLVMPNTY HRLCKWHLMQ  420
NALKGLNHLL RGEDEFRSDL DACFKIWEEE EEFLSAWDAI LHKYNAFDNS WLQSAFEVKE  480
KWAKAYVKMS FSAGMTITQL SESINSDLKD YLQSDYDIVK FFIHFERLLD AKRYKELKGE  540
YNLRQKLPKV KIASPMVIQA AHIYTPKLFL KFQEQYEEFQ GAFVKERVER NATHEYIVSI  600
YGKPKDRRDK HLTSSMQVNE VISYNHLPYI DHSAQGKSIR NDQEQSSFGT FENLVNFYGM  660
TNPYVPLPCS KNPSDLEGDD ISSLLTKFTT GKIEAFST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-99	FAR1 family protein