PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023872460.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 633aa MW: 70784.3 Da PI: 4.865

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023872460.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	122.1	4.8e-38	27	148	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +rF+Ptd+el+ +Lk+k+++++ ++ +++ev+ yk+ePwdL+ k ++++++ew+fF+ + ++++gk +nr+t++gyWk tg+d++++s +g XP_023872460.1 27 IRFSPTDKELIELFLKPKITRNDEDI-YFVPEVEFYKLEPWDLQyKsGIDTKDQEWFFFAAQGLQHQKGKGRNRKTEKGYWKVTGNDRKIKS-EG 119 69*******************999.78**********95247777999**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLvf+ gr++kg t+Wvmheyr XP_023872460.1 120 TVIGMKKTLVFHIGRSRKG--TKWVMHEYRT 148 9*************7..9*****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MKKANNNIHR IGMSDMVQDL QIECAIIRFS PTDKELIELF LKPKITRNDE DIYFVPEVEF 60 YKLEPWDLQY KSGIDTKDQE WFFFAAQGLQ HQKGKGRNRK TEKGYWKVTG NDRKIKSEGT 120 VIGMKKTLVF HIGRSRKGTK WVMHEYRTTL KDLDGTHPGQ KAFVLCRLFN NEEKSNKGGP 180 AKSKPALAPV SSALEVQAET YQTSNQSCYA EISDQMMPDA TEPVQCNNHK DYHNEDVAEN 240 QVAEVTSSEV DFNKDMEHLL HMFYVPSAED SPSSLRPNTS GASTPITVKS SCEAMQSEPT 300 LAPASQAFPE QVEKHLINCR TRFDIVAPFA CSNSYSEYAT ENQVAEVKAT EFELEMEEAH 360 KMFYSHPPEP LDCNFFSPST LTPVAPAVSF PTTIKASLEE ARSMPALASV STELGSEADN 420 YPTSFRRFPA EKSDGIISNT IAPIEYNGYD TYVGKVKVAE VASDEVDLQL GVSSEPLGCN 480 MLYPLHSQMQ EELGSSCSSY PFPNYLNSGH WGVQHQYGTN EPAPNISESW GLTLGNRGDC 540 LHNKSSSSQN NIVFDNETLI NMVSAKDNLA DANARIELEH QDLVWLDEII NPEVSLGLLK 600 SASYIESVER SSDQIIGLKK FCWNAGVLRC LCV

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MKKANNNIHR IGMSDMVQDL QIECAIIRFS PTDKELIELF LKPKITRNDE DIYFVPEVEF  60
YKLEPWDLQY KSGIDTKDQE WFFFAAQGLQ HQKGKGRNRK TEKGYWKVTG NDRKIKSEGT  120
VIGMKKTLVF HIGRSRKGTK WVMHEYRTTL KDLDGTHPGQ KAFVLCRLFN NEEKSNKGGP  180
AKSKPALAPV SSALEVQAET YQTSNQSCYA EISDQMMPDA TEPVQCNNHK DYHNEDVAEN  240
QVAEVTSSEV DFNKDMEHLL HMFYVPSAED SPSSLRPNTS GASTPITVKS SCEAMQSEPT  300
LAPASQAFPE QVEKHLINCR TRFDIVAPFA CSNSYSEYAT ENQVAEVKAT EFELEMEEAH  360
KMFYSHPPEP LDCNFFSPST LTPVAPAVSF PTTIKASLEE ARSMPALASV STELGSEADN  420
YPTSFRRFPA EKSDGIISNT IAPIEYNGYD TYVGKVKVAE VASDEVDLQL GVSSEPLGCN  480
MLYPLHSQMQ EELGSSCSSY PFPNYLNSGH WGVQHQYGTN EPAPNISESW GLTLGNRGDC  540
LHNKSSSSQN NIVFDNETLI NMVSAKDNLA DANARIELEH QDLVWLDEII NPEVSLGLLK  600
SASYIESVER SSDQIIGLKK FCWNAGVLRC LCV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	6e-48	NAC family protein