PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023872445.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 223aa MW: 24718.4 Da PI: 6.5178 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.4 | 1.1e-20 | 54 | 103 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g XP_023872445.1 54 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAMAYDKAALRFKG 103 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MSAMVSALTQ VIGTVDEKPT LVQSTPLAIR ECAVKEEPDS SQPVQDQEIA RRRHYRGVRQ 60 RPWGKWAAEI RDPKKAARVW LGTFDTAEDA AMAYDKAALR FKGTKAKLNF PERVQGKTEF 120 GYLTGTHGNT SGVSHEQNPS PVIPPPPPLP FMSQQEAFPG LYQYAQLLSS TDIEFPGYTS 180 NLFNQQSFAS QFSSSSPSST TSSHQQQHQE EHGKDFDSSN PSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 3e-41 | ERF family protein |