PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872407.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 287aa    MW: 31407.1 Da    PI: 4.7785
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.96e-194189355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr+++ +gr++AeIrdps+   + r++lg+f+taeeAa a+++a+++++g
  XP_023872407.1 41 FLGVRRRP-WGRYAAEIRDPST---KERHWLGTFDTAEEAALAYDRAARSMRG 89
                    56******.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDFNNNSSPA NSPSSSKSKR KAQPQQQQTP LQNQQGEALR FLGVRRRPWG RYAAEIRDPS  60
TKERHWLGTF DTAEEAALAY DRAARSMRGS KARTNFVYSD MPRGSSVTSI ISPDETHHEI  120
SPLFTPALQH HQQNDTTNNT NTTTTELFFT QDPFNAACPF SGWAQGNSTT LDSYQPITGI  180
MDTDTGLSHS QTYSDSTQLP PLPPDASSSF YGSGLLGSDM GQGVWTDTNF IGFSEDTTNG  240
LDSALTGPYL GFDSNEFVQH SPLFGRMPPV PDTSTTGFDL GSSSAFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.12e-36ERF family protein