PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023872288.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 661aa MW: 75102.1 Da PI: 4.9547

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023872288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182	1.5e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k++l e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_023872288.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+y+grap+g +tdWvmheyrl XP_023872288.1 100 S-QTRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIDLEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECEI PSGLQDAYAL CRVFKKSATG PKIGEHYAIP TTSYQLTSDH 180 SSSIELYSEG RCEDLESTDY RMPYDNSCSP NMVAGSSHDI SGTRDGKWMQ FLSEDAFNFT 240 PPPFPNYGSV SYPPSKVDIT LECARLQHRF SLPSLEVEDF PQVGFTDFKV SQLTPICESA 300 SETDILQEIL SVAQASQGLT NQNNFPGTWG GNYAPDDDFS FMVGRDTYNQ VNDVSAERYI 360 DKPWEDPNAR SIQIGDLDED FKTERMTENL RWVGMSDKEL EKSFTEEHKV VPIEDISNFP 420 RREEHEFQGE SGYDKSCKEF NDSEMNNFQL GFIDEPNENF LDDGNLEDYS SSPSFEVIEE 480 VKVNHGMFIS TRQVAETFFQ QIVPSQTVKV HLNPVLVSSF SIEKEDAQIT AENRASLLRK 540 FKAFARGKFV AFTKAVNPCA IMCMVTLLLV HIYLGEHVEE EKLMDGFSST GSVKEEGCSN 600 NGNSKKIPGR IKCNDKRGQV SVVTNTEGGN SFSAFFKRIE IFLTVSLALF TMWANHIIPR 660 D

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIDLEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QTRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECEI PSGLQDAYAL CRVFKKSATG PKIGEHYAIP TTSYQLTSDH  180
SSSIELYSEG RCEDLESTDY RMPYDNSCSP NMVAGSSHDI SGTRDGKWMQ FLSEDAFNFT  240
PPPFPNYGSV SYPPSKVDIT LECARLQHRF SLPSLEVEDF PQVGFTDFKV SQLTPICESA  300
SETDILQEIL SVAQASQGLT NQNNFPGTWG GNYAPDDDFS FMVGRDTYNQ VNDVSAERYI  360
DKPWEDPNAR SIQIGDLDED FKTERMTENL RWVGMSDKEL EKSFTEEHKV VPIEDISNFP  420
RREEHEFQGE SGYDKSCKEF NDSEMNNFQL GFIDEPNENF LDDGNLEDYS SSPSFEVIEE  480
VKVNHGMFIS TRQVAETFFQ QIVPSQTVKV HLNPVLVSSF SIEKEDAQIT AENRASLLRK  540
FKAFARGKFV AFTKAVNPCA IMCMVTLLLV HIYLGEHVEE EKLMDGFSST GSVKEEGCSN  600
NGNSKKIPGR IKCNDKRGQV SVVTNTEGGN SFSAFFKRIE IFLTVSLALF TMWANHIIPR  660
D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-172	NAC family protein