PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872242.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 322aa    MW: 35761.9 Da    PI: 5.1453
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872242.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.8e-1977125355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a+++ ++k++g
  XP_023872242.1  77 YRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDREARKIRG 125
                     9*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MCGGAILANL IPRRQNGGRV TTSDLWPNAK PSSFESHMCR LSEADSAPLK RPHSVKTPSG  60
GVQETEKPVK RQRKNLYRGI RQRPWGKWAA EIRDPRKGVR VWLGTFNTAE EAARAYDREA  120
RKIRGKKAKV NFPNEDEKQG SYTQIRTNPP SLRNNPSFPL YQTQNPNLNN GFSKSSDLFG  180
FDYDLNEFGG FDCDGFDSIG LVNADPIVIE QNSVSGSGSM SEGANSSNGL LCVNPVVQEV  240
KVKEEVAKQE IATVGEEEKN EIQKLSDDLM AYENFMKFYQ IPYYDGQSVA PPVTIAAQEN  300
LVDDLWSFDD DEAVGSSVSP PM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-34ERF family protein