PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023872104.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 29119.6 Da PI: 7.2185 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.4 | 4.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd +l +v+++G +W+ ++ g+ R++k+c++rw +yl XP_023872104.1 14 KGAWSLEEDNKLRAYVQRYGHWNWRELPKFAGLSRCGKSCRLRWMNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 58.5 | 1.5e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eEde++++++++lG++ W++Ia+++ gRt++++k++w+++l XP_023872104.1 67 RGKYTKEEDEKIIKLHQELGNK-WSKIAAKLA-GRTDNEIKNHWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MVKAPYYDKN GVKKGAWSLE EDNKLRAYVQ RYGHWNWREL PKFAGLSRCG KSCRLRWMNY 60 LRPDVKRGKY TKEEDEKIIK LHQELGNKWS KIAAKLAGRT DNEIKNHWHT HLKKRAKENQ 120 VSSEVKEHPS DISQCETISR NRDSEAESVP GNAPSRLILE SSPLSPETSS SYFSTLSSHH 180 QAPPPPSGIN QIAEEGVASS ETFDEFIGDF WTEPFVADNT FFQNSCPLSL LNRGLISPCV 240 SYYDDDIDLF YQVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 8e-57 | MYB family protein |