PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872072.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 282aa    MW: 32030.5 Da    PI: 5.0512
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-09164208655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++ r RR++i ++ +eL +l+P +      K++ ae+L+ A +Y+k+Lq
  XP_023872072.1 164 SIAARERRRKITEKTQELGRLIPGC-----SKMNTAEMLQAASKYVKYLQ 208
                     67889*******************9.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MALSTYTELG TLQHLNTQIS FQQRQAELAG ELLSYSNNFE LQNTLLHPLN DQESFLHPEE  60
CYTHLLPYLS SSCEPFISLS EMVTPPQDFE PYSFPKRQRC HENQFSLDFT PTFFDGLVPN  120
PCMVAEVLPE LFSQLPEYGI PQVDCTQSVE SSKKMNEKCV SAQSIAARER RRKITEKTQE  180
LGRLIPGCSK MNTAEMLQAA SKYVKYLQAQ VGILELMSSF QETYAVSPTE MQVILASPRV  240
QEKLYLEDKC LVPKELSKLC VKEHHDILSK PSISNDHSPG QI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.17e-31bHLH family protein