PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023872048.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 229aa    MW: 25403.9 Da    PI: 4.4314
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023872048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35.2e-202676155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr++k +g+Wv+eIr p++   r r++lg+++t+e+Aa+a +aa  +l+g
  XP_023872048.1 26 TKYKGVRRRK-WGKWVSEIRLPNS---RERIWLGSYDTPEKAARAFDAALFCLRG 76
                    69*****998.**********933...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MLKPTTITTS SSSSREVQQP SEQSDTKYKG VRRRKWGKWV SEIRLPNSRE RIWLGSYDTP  60
EKAARAFDAA LFCLRGPDAK FNFPDTPPEI NINANGRQTL SPQEIRVLAA RFANDDDDKD  120
SHPPKDNDFL GESSSHMVVD QCYTPSTSSV SDGTVHVDSN NEAMDWSFLS MLDSNDMGIS  180
SDFGLFSGLE SLHSGEMLYP PVLPGPVADN NGDENAAEAF SQPSFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12935KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-46ERF family protein