PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023871202.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 943aa MW: 104557 Da PI: 7.0262

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023871202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.3	3e-06	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ks+ r ++L rH r+H XP_023871202.1 74 YSCGRCSKSYARLDHLSRHVRMH 96 99*******************99 PP
2	zf-C2H2	20.3	1.5e-06	102	124	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F r ++LkrH H XP_023871202.1 102 YQCQVCTKAFARADLLKRHTLGH 124 9******************8766 PP

Sequence ? help Back to Top
Protein Sequence Length: 943 aa Download sequence
MAMAAHHGPD EPLPAEASPD DASAAGNGEP AHKRVKSLSV DGGDATALSP VVDDHVEVKQ 60 SNTPASGPAS QRLYSCGRCS KSYARLDHLS RHVRMHTQEK PYQCQVCTKA FARADLLKRH 120 TLGHNKDDPK AKPSVIQHSR VSQACEACAG LHLKCEEDKP CKRCTKKGIT CNFTAAFGPE 180 AEMEGSPQQR HQHSLNQRYA RGSEPQQYQG QMHQPPQIHN IPPIPQMQQV QSQNPAAQRA 240 DHSMVRTPIQ LPSMQVNNGQ HTPMSINGPV MLPQQNTPSN GGGMEYMRDT PMPPIPLPHG 300 QGGQMMDYQQ TGPWPARELF DFGVDTNMEL NDLDLSFLDT YNNANPFDLH PQDMSFAASG 360 SDIVPSFTSA PVPPLDTTVL PNASVWRFRP LAKDSGSAEQ ANLSLPTPSS LEIDRRVTCE 420 PLSQTSRDKV LAMILSTCKP NSIPRAVACF PSISLLDSLF QFSLTSPGSH AKHWIHASSL 480 LAAQTRPEVL AAIIAAGAVL TPDASIRKVG YAIQEAIRTA VQVQVEEDNT LMRDLQIMQA 540 SLLQLKIGLW SGDSRKMELA EGFQQVLVTM ARRGGFFRRG TYERIVPYAE DTGELLETRW 600 RQWVKQESRK RFALHLFRHD LEASVSLLSS PLISYAELYL PLPESEALWH APSAEQWKAT 660 YMRSSAPRWE RQPSLVDCIQ DLDILATKDI GLDQRQASMA VLGAAWRMIW EYRQLDSSMK 720 DYTSQWCNSN LLMSARHSEL TKLLQCFRLS SVEDAKVTLI LELLLMHLHI SIDDIHLFAG 780 VEGGDEARRV YPALVQWTRT TTARQALWHA GQVIRAARTL RQGLICDFAA IACYQASLAF 840 WCYGIITRAG DDAHMSSSQI TAWLDSTDDK GVQRWIISGE GDAAIHAWVE SSPRKSWALV 900 GSPDEAVTAV VTTMRRNHNE ARSPPLVDNL INIMEGLRKA ART

Sequence ? help Back to Top

Protein Sequence Length: 943 aa Download sequence

MAMAAHHGPD EPLPAEASPD DASAAGNGEP AHKRVKSLSV DGGDATALSP VVDDHVEVKQ  60
SNTPASGPAS QRLYSCGRCS KSYARLDHLS RHVRMHTQEK PYQCQVCTKA FARADLLKRH  120
TLGHNKDDPK AKPSVIQHSR VSQACEACAG LHLKCEEDKP CKRCTKKGIT CNFTAAFGPE  180
AEMEGSPQQR HQHSLNQRYA RGSEPQQYQG QMHQPPQIHN IPPIPQMQQV QSQNPAAQRA  240
DHSMVRTPIQ LPSMQVNNGQ HTPMSINGPV MLPQQNTPSN GGGMEYMRDT PMPPIPLPHG  300
QGGQMMDYQQ TGPWPARELF DFGVDTNMEL NDLDLSFLDT YNNANPFDLH PQDMSFAASG  360
SDIVPSFTSA PVPPLDTTVL PNASVWRFRP LAKDSGSAEQ ANLSLPTPSS LEIDRRVTCE  420
PLSQTSRDKV LAMILSTCKP NSIPRAVACF PSISLLDSLF QFSLTSPGSH AKHWIHASSL  480
LAAQTRPEVL AAIIAAGAVL TPDASIRKVG YAIQEAIRTA VQVQVEEDNT LMRDLQIMQA  540
SLLQLKIGLW SGDSRKMELA EGFQQVLVTM ARRGGFFRRG TYERIVPYAE DTGELLETRW  600
RQWVKQESRK RFALHLFRHD LEASVSLLSS PLISYAELYL PLPESEALWH APSAEQWKAT  660
YMRSSAPRWE RQPSLVDCIQ DLDILATKDI GLDQRQASMA VLGAAWRMIW EYRQLDSSMK  720
DYTSQWCNSN LLMSARHSEL TKLLQCFRLS SVEDAKVTLI LELLLMHLHI SIDDIHLFAG  780
VEGGDEARRV YPALVQWTRT TTARQALWHA GQVIRAARTL RQGLICDFAA IACYQASLAF  840
WCYGIITRAG DDAHMSSSQI TAWLDSTDDK GVQRWIISGE GDAAIHAWVE SSPRKSWALV  900
GSPDEAVTAV VTTMRRNHNE ARSPPLVDNL INIMEGLRKA ART