PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023870868.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 1069aa MW: 116324 Da PI: 7.5035

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023870868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.9e-05	231	251	1	21
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 y+Cp+C+k++ + +LkrH+ XP_023870868.1 231 YPCPHCNKTYLHAKHLKRHLL 251 99*****************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1069 aa Download sequence
MDHSFGGYLY NQQQGQSSQQ PSQGLSSFGN LSAAQQQHHQ HDSNTHPTLP PLQQAGQNGG 60 YSFGNLSYAG AHANVPGAQA HTSSTPHTPA TSSMTAANAY VQMSPSQMQQ NSMPPPSSFN 120 APYMNQAMMY QSSTSTATPP TTASAGLPNI RPMPPGGVNG GLNGLPSMPS AGQLGLQPAF 180 VQNEEAPTHV VGSQGRRGVL PSAPGRPSAP TSGAPGAVKS LIPTKDADGK YPCPHCNKTY 240 LHAKHLKRHL LRRKAAIGKV GKDVANVHAD TGDRPYMCHL CKDTFSRSDI LKRHFQKCSI 300 RRGNPTGANH LAHQNRRNTN ASNRLSMSQT DGPIGLAGFA EVNGTAYNSH VMGTQSPNGD 360 ASARSSRANS LISPGNMSQR GSVAGLGILG THTPQNEQMA TSVAYQQGMP AYSNQLQPNY 420 AFNQQQLNGN VYANQAQQMS FLGQTSSRYN NTRPNNDSQN ANGDAHGTQL DWSRAFIEGG 480 QDGFVGGQPA NASSSINIKT ESDARPSYGV SDDMHDDSFL GSLYSHPSAF GSEYTEQDQG 540 IPGFPNWSMD DTLQAKIDGL SHFCFPEGFE AMQNRPGATI VKACLTVENV KHFAEHYASY 600 HEHWPLLHMP TFKLVHADNG LVMAIICIGA VYSPKLNVTQ VRQMMEFVRS VVISNSSIHT 660 RTSNGQTEGL GSSSWDLEEL QALLMLQIMF TWHGDPTHRQ SARNDFPPLV RIATAMKLCQ 720 TVDSSHYAYS VLHASDGSPS SPIDAQSFDW HSWLEQEKRN RALYMLYLLD AATVMWFNTM 780 PNFDPFDISL MLPSDDAAWD ARDQSECANA LGLDGAPNQW RNSSGTRHAK QLGMREAMRT 840 LLEPTAVFQA GATNAYSKFI LIHAVVVRVI TCQKVLLQPE SSSIAVSFGP NGSGPATPLS 900 QNDWLEHHGK PGSSSSGHAT PTESSGSGLN TVAAEHEKKR LMYALDKWKR MWDVDMDIQY 960 PPMRSQSRRF GFSRDGVHFF YLGRSFMQSQ RATDWSAPPD TRFKQVMALL KRIKGFVVGD 1020 NELRGQEIGS VGDIDDTYGL DNLTLDMKLL FRPHSHTDHS VAGVQTTSL

Sequence ? help Back to Top

Protein Sequence Length: 1069 aa Download sequence

MDHSFGGYLY NQQQGQSSQQ PSQGLSSFGN LSAAQQQHHQ HDSNTHPTLP PLQQAGQNGG  60
YSFGNLSYAG AHANVPGAQA HTSSTPHTPA TSSMTAANAY VQMSPSQMQQ NSMPPPSSFN  120
APYMNQAMMY QSSTSTATPP TTASAGLPNI RPMPPGGVNG GLNGLPSMPS AGQLGLQPAF  180
VQNEEAPTHV VGSQGRRGVL PSAPGRPSAP TSGAPGAVKS LIPTKDADGK YPCPHCNKTY  240
LHAKHLKRHL LRRKAAIGKV GKDVANVHAD TGDRPYMCHL CKDTFSRSDI LKRHFQKCSI  300
RRGNPTGANH LAHQNRRNTN ASNRLSMSQT DGPIGLAGFA EVNGTAYNSH VMGTQSPNGD  360
ASARSSRANS LISPGNMSQR GSVAGLGILG THTPQNEQMA TSVAYQQGMP AYSNQLQPNY  420
AFNQQQLNGN VYANQAQQMS FLGQTSSRYN NTRPNNDSQN ANGDAHGTQL DWSRAFIEGG  480
QDGFVGGQPA NASSSINIKT ESDARPSYGV SDDMHDDSFL GSLYSHPSAF GSEYTEQDQG  540
IPGFPNWSMD DTLQAKIDGL SHFCFPEGFE AMQNRPGATI VKACLTVENV KHFAEHYASY  600
HEHWPLLHMP TFKLVHADNG LVMAIICIGA VYSPKLNVTQ VRQMMEFVRS VVISNSSIHT  660
RTSNGQTEGL GSSSWDLEEL QALLMLQIMF TWHGDPTHRQ SARNDFPPLV RIATAMKLCQ  720
TVDSSHYAYS VLHASDGSPS SPIDAQSFDW HSWLEQEKRN RALYMLYLLD AATVMWFNTM  780
PNFDPFDISL MLPSDDAAWD ARDQSECANA LGLDGAPNQW RNSSGTRHAK QLGMREAMRT  840
LLEPTAVFQA GATNAYSKFI LIHAVVVRVI TCQKVLLQPE SSSIAVSFGP NGSGPATPLS  900
QNDWLEHHGK PGSSSSGHAT PTESSGSGLN TVAAEHEKKR LMYALDKWKR MWDVDMDIQY  960
PPMRSQSRRF GFSRDGVHFF YLGRSFMQSQ RATDWSAPPD TRFKQVMALL KRIKGFVVGD  1020
NELRGQEIGS VGDIDDTYGL DNLTLDMKLL FRPHSHTDHS VAGVQTTSL